Plant diseases can cause up to 50% crop yield loss for the popular tomato plant. A mobile device-based method to identify diseases from photos of symptomatic leaves via computer vision can be more effective due to its convenience and accessibility. To enable a practical mobile solution, a “shallow” convolutional neural networks (CNNs) with few layers, and thus low computational requirement but with high accuracy similar to the deep CNNs is needed. In this work, we explored if such a model was possible.
Engineered bacteria that degrade oil are currently being considered as a safe option for the treatment of oil spills. For this approach to be successful, the bacteria must effectively express oil-degrading genes they uptake as part of an external genoming vehicle called a "plasmid". Using a computational approach, the authors investigate plasmid-bacterium compatibility to find pairs that ensure high levels of gene expression.
Vibrato, defined as a rapid and subtle oscillation in pitch, is a technique that is commonly used by musicians to add expression and colour to notes. However, on stringed instruments, there are certain notes (open string notes) on which it is impossible to perform the technique. Without vibrato, they can sound angular and unpleasant, especially when juxtaposed against other notes played with vibrato. String players therefore use an alternative to achieve the same vibrato effect on the open string — a technique referred to as “open string vibrato”. While the technique is widely used, it is unknown how much of a physical effect it has on the sound waves produced, if any at all. The purpose of this study is to analyse open string vibrato using a statistical approach to provide evidence to characterize the physical effect of the technique, and then compare it to normal vibrato. We hypothesised that it would have a noticeable and measurable effect on the sound waves produced because of the technique’s widespread usage. To test this, notes, with and without either open string vibrato or normal vibrato, were recorded on the violin. We analyzed the audio recordings using a computational and statistical approach. The results of the study partially agreed with our hypothesis: while the technique has an observable physical effect on the sound waves, the effect is weaker than expected. We concluded that open string vibrato does work, but has quite a subtle effect, and thus should only be used when there is no other option.
Here, the authors investigated the integration of large language models (LLMs) with drug target affinity predictors (DTAPs) to improve drug repurposing, demonstrating a significant increase in prediction accuracy, particularly with GPT-4, for psychotropic drugs and the sigma-1 receptor. This novel approach offers to potentially accelerate and reduce the cost of drug discovery by efficiently identifying new therapeutic uses for existing drugs.
In this article the authors created an interaction map of proteins involved in colorectal cancer to look for driver vs. non-driver genes. That is they wanted to see if they could determine what genes are more likely to drive the development and progression in colorectal cancer and which are present in altered states but not necessarily driving disease progression.
The sequence of nitrogenous bases that make up the DNA of organisms can contain hidden mathematical sequences. Here the authors used BioPython, a programming tool, to find an organism that displays Gijswijt’s Sequence in its genome. In this manner they found that the common carp best displays Gijswijt’s Sequence in its genome.
The authors used a particle-in-cell simulation to determine the effects on extensive and intensive metrics. They found that preliminary simulations could be run quickly with much lower particle counts before more technically demanding and comprehensive simulations are performed.
The authors use machine learning to analyze electroencephalogram data and identify slowing patterns that can indicate undetected disorders like epilepsy or dementia
