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Cutibacterium acnes sequence space topology implicates recA and guaA as potential virulence factors

Bohdan et al. | May 01, 2025

<i>Cutibacterium acnes</i> sequence space topology implicates <i>recA</i> and <i>guaA</i> as potential virulence factors
Image credit: Bohdan and Platje 2025

Cutibacterium acnes is a bacterium believed to play an important role in the pathogenesis of common skin diseases such as acne vulgaris. Currently, acne is known to be associated with strains from the type IA1 and IC clades of C. acnes, while those from the type IA2, IB, II, and III phylogroups are associated with skin health. This is the first study to explore the sequence space of individual gene products of different C. acnes phylogroups. Our analysis compared the sequence space topology of virulence factors to proteins with unknown functions and housekeeping proteins. We hypothesized that sequence space features of virulence factors are different from housekeeping protein features, which potentially provides an avenue to deduce unknown proteins’ functions. This proposition should be confirmed based on further experimental outcomes. A notable similarity in the sequence spaces’ topological features of previously known as housekeeping proteins encoded by recA and guaA genes to ‘putative virulence’ genes camp2 and tly was observed. Our research suggests further investigation of recA and guaA’s potential virulence properties to better understand acne pathogenesis and develop more targeted acne treatments.

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Implication of education levels on gender wage gap across states in the United States and Puerto Rico

Dash et al. | Apr 16, 2025

Implication of education levels on gender wage gap across states in the United States and Puerto Rico

Here the authors examined the relationship between education levels and the gender wage gap (GWG) in the US and Puerto Rico from 2010 to 2022, hypothesizing that higher education would correlate with a lower GWG. Their analysis of income data revealed an inverse correlation, where higher education levels were associated with reduced gender wage disparities, suggesting that policies aimed at closing the gender gap in higher education could promote socioeconomic equality.

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Forecasting air quality index: A statistical machine learning and deep learning approach

Pasula et al. | Feb 17, 2025

Forecasting air quality index: A statistical machine learning and deep learning approach
Image credit: Amir Hosseini

Here the authors investigated air quality forecasting in India, comparing traditional time series models like SARIMA with deep learning models like LSTM. The research found that SARIMA models, which capture seasonal variations, outperform LSTM models in predicting Air Quality Index (AQI) levels across multiple Indian cities, supporting the hypothesis that simpler models can be more effective for this specific task.

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Obscurity of eyebrows influences recognition of human emotion and impacts older adolescents

Zhang et al. | Jan 20, 2025

Obscurity of eyebrows influences recognition of human emotion and impacts older adolescents
Image credit: Ernesto Norman

Here, seeking to better understand how facial features provide important visual cues to help convey emotions, the authors evaluated the accuracy and reaction time of participants in regards to experimental photographs where a person's eyebrows were obscured and ones where they were not. Their findings revealed that removing eyebrows resulted in a significant decrease in a participant's ability to recognize anger, with adolescents most likely to misidentify emotions.

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Advancing pediatric cancer predictions through generative artificial intelligence and machine learning

Yadav et al. | Dec 21, 2024

Advancing pediatric cancer predictions through generative artificial intelligence and machine learning

Pediatric cancers pose unique challenges due to their rarity and distinct biological factors, emphasizing the need for accurate survival prediction to guide treatment. This study integrated generative AI and machine learning, including synthetic data, to analyze 9,184 pediatric cancer patients, identifying age at diagnosis, cancer types, and anatomical sites as significant survival predictors. The findings highlight the potential of AI-driven approaches to improve survival prediction and inform personalized treatment strategies, with broader implications for innovative healthcare applications.

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