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Genetic Bioaugmentation of Oryza sativa to Facilitate Self-Detoxification of Arsenic In-Situ

Bhat et al. | Dec 03, 2024

Genetic Bioaugmentation of Oryza sativa to Facilitate Self-Detoxification of Arsenic In-Situ

Arsenic contamination in rice, caused by the use of arsenic-laden groundwater for irrigation, is a growing global concern, affecting over 150 million people. To address this, researchers hypothesized that genetically modifying rice plants with arsenic-resistant genes could reduce arsenic uptake and allow the plants to detoxify arsenic, making them safer to consume.

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The knowledge and perception of opioid abuse and its long-term effects among high schoolers

Shroff et al. | Nov 27, 2021

The knowledge and perception of opioid abuse and its long-term effects among high schoolers

Due to the susceptibility of adolescent age groups to opioid misuse, here the authors sought to determine if there was a difference in the perception and knowledge between 9th and 12th graders regarding the opioid crisis. An educational intervention trial was done with the 9th graders and surveys were used to identify its effects. Although the authors acknowledge a small sample size, their results suggest that their are gaps within the knowledge of adolescents in regards to opioid misuse and its long-term effects that could be addressed with further education.

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Analyzing relationships and distribution between age, sex, and eye disease at IGMCH eye OPD

Sareen et al. | Feb 20, 2025

Analyzing relationships and distribution between age, sex, and eye disease at IGMCH eye OPD
Image credit: Amanda Dalbjörn

This study analyzed patient demographics in the ophthalmology department at Indira Gandhi Medical College and Hospital (IGMCH) to assess relationships between age, sex, and eye conditions. While the overall sex distribution was equal, individual conditions varied, with cataracts and retinal disorders more common in males and conjunctival conditions slightly more prevalent in females, though none were statistically significant (p > 0.05) except for cataract patients aged 50–89 (p < 0.001). Understanding these trends can help medical facilities allocate resources more effectively for improved patient care.

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Predicting smoking status based on RNA sequencing data

Yang et al. | Aug 30, 2024

Predicting smoking status based on RNA sequencing data
Image credit: Yang and Stanley 2024

Given an association between nicotine addiction and gene expression, we hypothesized that expression of genes commonly associated with smoking status would have variable expression between smokers and non-smokers. To test whether gene expression varies between smokers and non-smokers, we analyzed two publicly-available datasets that profiled RNA gene expression from brain (nucleus accumbens) and lung tissue taken from patients identified as smokers or non-smokers. We discovered statistically significant differences in expression of dozens of genes between smokers and non-smokers. To test whether gene expression can be used to predict whether a patient is a smoker or non-smoker, we used gene expression as the training data for a logistic regression or random forest classification model. The random forest classifier trained on lung tissue data showed the most robust results, with area under curve (AUC) values consistently between 0.82 and 0.93. Both models trained on nucleus accumbens data had poorer performance, with AUC values consistently between 0.65 and 0.7 when using random forest. These results suggest gene expression can be used to predict smoking status using traditional machine learning models. Additionally, based on our random forest model, we proposed KCNJ3 and TXLNGY as two candidate markers of smoking status. These findings, coupled with other genes identified in this study, present promising avenues for advancing applications related to the genetic foundation of smoking-related characteristics.

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Identification of microwave-related changes in tissue using an ultrasound scan

Shariff et al. | Apr 24, 2024

Identification of microwave-related changes in tissue using an ultrasound scan
Image credit: Shariff and Shariff 2024

Microwave energy (ME) is used in the medical field to denature protein structures, resulting in inactivation or destruction of abnormal cells. Identifying the extent of destruction of abnormal tissue (cancer tissue or tissue with abnormal electrical activity) is essential for accomplishing successful therapy and reducing collateral damage. Our study was an ex vivo assessment of the changes on ultrasound scans (US) in chicken tissue exposed to ME. We hypothesized that any changes in tissue structures would be recognized on the reflected ultrasound waves. Ultrasound scans of tissues change with exposure to microwaves with increasing reflection of ultrasound waves. With exposure to microwaves, surface level brightness on the ultrasound scans increases statistically significantly. The findings could be used in heat related (ME and radiofrequency) procedures where clinicians would be able to actively assess lesions in real-time. Further studies are required to assess changes in tissue during active exposure to different types of energies.

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