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Validating DTAPs with large language models: A novel approach to drug repurposing

Curtis et al. | Mar 02, 2025

Validating DTAPs with large language models: A novel approach to drug repurposing
Image credit: Growtika

Here, the authors investigated the integration of large language models (LLMs) with drug target affinity predictors (DTAPs) to improve drug repurposing, demonstrating a significant increase in prediction accuracy, particularly with GPT-4, for psychotropic drugs and the sigma-1 receptor. This novel approach offers to potentially accelerate and reduce the cost of drug discovery by efficiently identifying new therapeutic uses for existing drugs.

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Changing the surface properties of the backside of a silicon wafer to repel oil and prevent particle binding

Choi et al. | Feb 14, 2025

Changing the surface properties of the backside of a silicon wafer to repel oil and prevent particle binding

Wafers, essential in microchip production, can develop issues like leveling problems and wafer slip due to the formation of silanol bonds on their backside, which attract silica particles and oil. Authors tested addressing this issue with a coating of [acetoxy(polyethyleneoxy)propyl]triethoxysilane (APTS) applied to the wafer’s backside, preventing particle binding and oil adherence.

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Lettuce seed germination in the presence of microplastic contamination

Kochar et al. | Dec 09, 2024

Lettuce seed germination in the presence of microplastic contamination

Microplastic pollution is a pressing environmental issue, particularly in the context of its potential impacts on ecosystems and human health. In this study, we explored the ability of plants, specifically those cultivated for human consumption, to absorb microplastics from their growing medium. We found no evidence of microplastic absorption in both intact and mechanically damaged roots. This outcome suggests that microplastics larger than 10 μm may not be readily absorbed by the root systems of leafy crops such as lettuce (L. sativa).

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Converting SiO2 wafers to hydrophobic using chlorotrimethylsilane

Lee et al. | Aug 20, 2024

Converting SiO<sub>2</sub> wafers to hydrophobic using chlorotrimethylsilane

Semiconductors are the center of the fourth industrial revolution as they are key components for all electronics. Exposed wafers made of silicon (Si), which can easily oxidize, convert to silicon dioxide (SiO2). The surface of SiO2 wafers consists of many Si-OH bonds, allowing them to easily bond with water, resulting in a “wet” or hydrophilic condition. We sought to determine a way to modify the surface of SiO2 wafers to become hydrophobic to ensure safe wet cleaning.

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A HOG feature extraction and CNN approach to Parkinson’s spiral drawing diagnosis

Tripathi et al. | Aug 09, 2024

A HOG feature extraction and CNN approach to Parkinson’s spiral drawing diagnosis

Parkinson’s disease (PD) is a prevalent neurodegenerative disorder in the U.S., second only to Alzheimer’s disease. Current diagnostic methods are often inefficient and dependent on clinical exams. This study explored using machine and deep learning to enhance PD diagnosis by analyzing spiral drawings affected by hand tremors, a common PD symptom.

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A novel approach for predicting Alzheimer’s disease using machine learning on DNA methylation in blood

Adami et al. | Sep 20, 2023

A novel approach for predicting Alzheimer’s disease using machine learning on DNA methylation in blood
Image credit: National Cancer Institute

Here, recognizing the difficulty associated with tracking the progression of dementia, the authors used machine learning models to predict between the presence of cognitive normalcy, mild cognitive impairment, and Alzheimer's Disease, based on blood DNA methylation levels, sex, and age. With four machine learning models and two dataset dimensionality reduction methods they achieved an accuracy of 53.33%.

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The effect of activation function choice on the performance of convolutional neural networks

Wang et al. | Sep 15, 2023

The effect of activation function choice on the performance of convolutional neural networks
Image credit: Tara Winstead

With the advance of technology, artificial intelligence (AI) is now applied widely in society. In the study of AI, machine learning (ML) is a subfield in which a machine learns to be better at performing certain tasks through experience. This work focuses on the convolutional neural network (CNN), a framework of ML, applied to an image classification task. Specifically, we analyzed the performance of the CNN as the type of neural activation function changes.

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