In this article the authors created an interaction map of proteins involved in colorectal cancer to look for driver vs. non-driver genes. That is they wanted to see if they could determine what genes are more likely to drive the development and progression in colorectal cancer and which are present in altered states but not necessarily driving disease progression.
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Entropy-based subset selection principal component analysis for diabetes risk factor identification
In this article, the authors looked at developing a strategy that would allow for earlier diagnosis of Diabetes as that improves long-term outcomes. They were able to find that BMI, tricep skin fold thickness, and blood pressure are the risk factors with the highest accuracy in predicting diabetes risk.
Read More...Locating sources of a high energy cosmic ray extensive air shower using HiSPARC data
Using the data provided by the University of Twente High School Project on Astrophysics Research with Cosmics (HiSPARC), an analysis of locations for possible high-energy cosmic ray air showers was conducted. An example includes an analysis conducted of the high-energy rain shower recorded in January 2014 and the use of Stellarium™ to discern its location.
Read More...Fractal dimensions of crumpled paper
Here, beginning from an interest in fractals, infinitely complex shapes. The authors investigated the fractal object that results from crumpling a sheet of paper. They determined its fractal dimension using continuous Chi-squared analysis, thereby testing and validating their model against the more conventional least squares analysis.
Read More...Rhizosphere metagenome analysis and wet-lab approach to derive optimal strategy for lead remediation in situ
The Environmental Protection Agency (EPA) reports a significant number of heavy metal-contaminated sites across the United States. To address this public health concern, rhizoremediation using microbes has emerged as a promising solution. Here, a combination of soil microbes were inoculated in the rhizosphere in soil contaminated with 500 parts per million (ppm) of lead. Results showed rhizoremediation is an effective bioremediation strategy and may increase crop productivity by converting nonarable lands into arable lands.
Read More...Effects of different synthetic training data on real test data for semantic segmentation
Semantic segmentation - labelling each pixel in an image to a specific class- models require large amounts of manually labeled and collected data to train.
Read More...Toxicity of aminomethylphosphonic acid via the Wnt signaling pathway as a novel mechanism
The Wnt signaling pathway, known to coordinate important aspects of cellular homeostasis ranging from differentiation, proliferation, migration, and much more, is dysregulated in many human diseases. This study demonstrates that aminomethylphosphonic acid, which is the main metabolite found in the common herbicide Glyphosate, is toxic to planaria and capable of binding to canonical Wnt proteins.
Read More...Tomato disease identification with shallow convolutional neural networks
Plant diseases can cause up to 50% crop yield loss for the popular tomato plant. A mobile device-based method to identify diseases from photos of symptomatic leaves via computer vision can be more effective due to its convenience and accessibility. To enable a practical mobile solution, a “shallow” convolutional neural networks (CNNs) with few layers, and thus low computational requirement but with high accuracy similar to the deep CNNs is needed. In this work, we explored if such a model was possible.
Read More...Copper nanoparticle synthesis using Picea glauca ‘Conica’
The authors propose a method to recycle Christmas tree needles into a non-toxic reducing agent for synthesizing copper nanoparticles.
Read More...Pediatric probiotic culture survival study in acidic pH using an in vitro model
In this study, the authors investigate the effects of acidity on the survival of commercial probiotic Lovebug bacterial strains.
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