Browse Articles

Ribosome distribution affects stalling in amino-acid starved cancer cells

Deng et al. | Jan 07, 2022

Ribosome distribution affects stalling in amino-acid starved cancer cells

In this article, the authors analyzed ribosome profiling data from amino acid-starved pancreatic cancer cells to explore whether the pattern of ribosome distribution along transcripts under normal conditions can predict the degree of ribosome stalling under stress. The authors found that ribosomes in amino acid-deprived cells stalled more along elongation-limited transcripts. By contrast, they observed no relationship between read density near start and stop and disparities between mRNA sequencing reads and ribosome profiling reads. This research identifies an important relationship between read distribution and propensity for ribosomes to stall, although more work is needed to fully understand the patterns of ribosome distribution along transcripts in ribosome profiling data.

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Assessing and Improving Machine Learning Model Predictions of Polymer Glass Transition Temperatures

Ramprasad et al. | Mar 18, 2020

Assessing and Improving Machine Learning Model Predictions of Polymer Glass Transition Temperatures

In this study, the authors test whether providing a larger dataset of glass transition temperatures (Tg) to train the machine-learning platform Polymer Genome would improve its accuracy. Polymer Genome is a machine learning based data-driven informatics platform for polymer property prediction and Tg is one property needed to design new polymers in silico. They found that training the model with their larger, curated dataset improved the algorithm's Tg, providing valuable improvements to this useful platform.

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Increasing Average Yearly Temperature in Two U.S. Cities Shows Evidence for Climate Change

Savage et al. | Sep 20, 2018

Increasing Average Yearly Temperature in Two U.S. Cities Shows Evidence for Climate Change

The authors were interested in whether they could observe the effects of climate change by analyzing historical temperature data of two U.S. cities. They predicted that they should observe a warming trend in both cities. Their results showed that despite yearly variations, warming trends can be observed both in Rochester, NY and Seattle, WA which fit the predictions of climate change forecasts.

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The effect of common food preservatives on the growth of bacteria

Yulin et al. | Jul 06, 2025

The effect of common food preservatives on the growth of bacteria
Image credit: Michael Schiffer

Here the authors aimed to find the best preservative combinations to stop bacterial growth in food, using data modeling and biochemical experiments. They discovered that single preservatives are often not enough, with varying effectiveness against different bacteria, and suggest future research into combining preservatives for better results.

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Implication of education levels on gender wage gap across states in the United States and Puerto Rico

Dash et al. | Apr 16, 2025

Implication of education levels on gender wage gap across states in the United States and Puerto Rico

Here the authors examined the relationship between education levels and the gender wage gap (GWG) in the US and Puerto Rico from 2010 to 2022, hypothesizing that higher education would correlate with a lower GWG. Their analysis of income data revealed an inverse correlation, where higher education levels were associated with reduced gender wage disparities, suggesting that policies aimed at closing the gender gap in higher education could promote socioeconomic equality.

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