Cancer is often caused by improper function of a few proteins, and sometimes it takes only a few proteins to malfunction to cause drastic changes in cells. Here the authors look at the genes that were mutated in patients with a type of pancreatic cancer to identify proteins that are important in causing cancer. They also determined which proteins currently lack effective treatment, and suggest that certain proteins (named KRAS, CDKN2A, and RBBP8) are the most important candidates for developing drugs to treat pancreatic cancer.
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Activated NF-κB Pathway in an Irf6-Deficient Mouse Model for Van der Woude Syndrome
Van der Woude syndrome is a common birth defect caused by mutations in the gene Irf6. In this project, students used microarray expression analysis from wild-type and Irf6-deficient mice in order to identify gene networks or pathways differentially regulated due to the Irf6 mutation. They found NF-κB pathway to be activated in deficient mice.
Read More...Genetic underpinnings of the sex bias in autism spectrum disorder
Here, seeking to identify a possible explanation for the more frequent diagnosis of autism spectrum disorder (ASD) in males than females, they sought to investigate a potential sex bias in the expression of ASD-associated genes. Based on their analysis, they identified 17 ASD-associated candidate genes that showed stronger collective sex-dependent expression.
Read More...Analysis of complement system gene expression and outcome across the subtypes of glioma
Here the authors sought to better understand glioma, cancer that occurs in the glial cells of the brain with gene expression profile analysis. They considered the expression of complement system genes across the transcriptional and IDH-mutational subtypes of low-grade glioma and glioblastoma. Based on their results of their differential gene expression analysis, they found that outcomes vary across different glioma subtypes, with evidence suggesting that categorization of the transcriptional subtypes could help inform treatment by providing an expectation for treatment responses.
Read More...Effects of Ocean Acidification on Marine Calcium Carbonate
Industrialization has transformed human life and improved it for many. Nonetheless, a side effect has been an increase in chemical waste, which when not disposed of properly, has detrimental effects on surrounding habitats. An increase in ocean acidification could potentially affect many forms of life, disrupting the ecological balance in unforeseeable ways. In this article the authors explore the effect of acidification on corals and shells, and observe that an increase in ocean acidity has a significant effect on corals, but not shells. This illustrates how acidification could negatively affect marine life, and calls our attention to managing the factors that contribute to increasing the pH of the Earth's water bodies.
Read More...Pollination Patterns by Green-Backed Firecrown Hummingbirds
The Green-backed Firecrown hummingbird is an essential pollinator in the temperate rainforests of southern South America. However, little is known about the ecology of these birds. Authors examined the foraging patterns of these birds identifying interesting differences in foraging patterns among season, age and sex.
Read More...Characterization of Inflammatory Cytokine Gene Expression in a Family with a History of Psoriasis
Psoriasis is a heritable autoimmune disorder characterized by abnormal red and itchy skin patches. The authors study the family of a man with psoriasis. They explore whether the man's children, who do not show any symptoms of psoriasis, demonstrate gene expression consistent with the disease.
Read More...The Effects of Ocean Acidification on the Development and Calcification of the Larval Shells of the Red Abalone Haliotis rufescens Swainson, 1822
This study examines the effects of carbon dioxide and pH on the development of red abalone shells.
Read More...An Investigative Analysis of Climate Change Using Historical and Modern Weather Data
Climate change is an important and contentious issue that has far-reaching implications for our future. The authors here compare primary temperature and precipitation data from almost 200 years ago against the present day. They find that the average annual temperature in Brooklyn, NY has risen significantly over this time, as has the frequency of precipitation, though not the amount of precipitation. These data stress the need for more ecologically-conscious choices in our daily lives.
Read More...Genetic Bioaugmentation of Oryza sativa to Facilitate Self-Detoxification of Arsenic In-Situ
Arsenic contamination in rice, caused by the use of arsenic-laden groundwater for irrigation, is a growing global concern, affecting over 150 million people. To address this, researchers hypothesized that genetically modifying rice plants with arsenic-resistant genes could reduce arsenic uptake and allow the plants to detoxify arsenic, making them safer to consume.
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